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Endonucleases DNA-specific

Endonucleases DNA-specific

HL-dsDNase for removal of gDNA from RNA preparations

Endonucleases DNA-specific

Endonucleases DNA-specific, HL-dsDNase

OverView

HL-dsDNase is especially developed to remove contaminating genomic DNA from RNA preparations. Figure 1 shows that HL-dsDNase can reduce 50 ng of human gDNA to levels non-detectable by qPCR. In figure 2, a human  total RNA sample was treated with HL-dsDNase and analysed on the Bio-Rad Experion™ System. The results  indicate that HL-dsDNase has minimal impact on RNA quality and quantity.

HL-dsDNase is an engineered version of dsDNase that is rapidly and completely inactivated by incubation for 5 minutes at 58°C at pH 8.0 or above. Chemical inactivation in downstream compatible RT or PCR buffers allows milder heat inactivation and, in some cases, skipping heat inactivation altogether. This makes HL-dsDNase very useful for removal of DNA from RNA preparations since the enzyme may be inactivated using various strategies with reduced risk of auto-degradation of  RNA in the presence of magnesium, making HL-dsDNase an ideal enzyme when working with small volumens of RNA.

HL-dsDNase is also an excellent choice for removal of unwanted external DNA from samples prior to analysis of nucleic acids protected by biological membranes, e.g., bacteria, viruses, and sperm. Especially if using downstream analysis methods that might be affected by host cell DNA, as metagenomic sequencing and STR-profiling. The easy inactivation of HL-dsDNase makes it a fast and efficient alternative to methods as differential extraction, where sample material is often lost.

Recommended applications:

Key advantages with this Salt Active Nuclease:

  • Double-strand DNA specific endonuclease
  • Easily heat-inactivated by very moderate heat treatment
  • High specific activity
  • Useful for removal of DNA from RNA preps

Figures

Endonucleases DNA-specific - Figure 1
Figure 1. HL-dsDNase effectively removes gDNA
Endonucleases DNA-specific - Figure 1

HL-dsDNase removes at least 50 ng of gDNA in a 10 µl reaction volume at pH 7.5.

Endonucleases DNA-specific - Figure 2
Figure 2. HL-dsDNase treatment has minimal impact on RNA integrity
Endonucleases DNA-specific - Figure 2

RNA incubated in buffer (lanes 1-4), water (lanes 5-8) or 0.1 U/µl HL-dsDNase (lane 9-12). Samples were analysed using Bio-Rad Experion™ RNA Eukaryote Total RNA StdSens Assay.

Endonucleases DNA-specific - Figure 3
Figure 3. HL-dsDNase has minimal impact on RNA quantity
Endonucleases DNA-specific - Figure 3

HL-dsDNase effectively removes gDNA from RNA without affecting SDHA (mRNA) quantification.

Properties

Specifications
Unit Definition

One unit is defined as an increase in absorbance at 260 nm of 0.001 per minute, using 50 µg/ml of high MW DNA in 100 mM Na-acetate pH 5.0 and 5 mM MgCl2.

Recommended Reaction and Conditions
  • Temp.:20 - 40°C, optimal: 37°C
  • Salt conc.: (NaCI/KCI): 0 - 50 mM, optimal: 0 mM
  • Mg2+: 4 - 10 mM, minimum: 2.5 mM
  • pH 7-8.3, optimal: 7.5
Storage buffer

20 mM Tris-HCl pH 7.5, 2 mM MgCl2, 10 mM NaCl, 0.01% (v/v) Tween 20, 50% (v/v) glycerol*

*Glycerol-Free version do not contain glycerol.

Purity

HL-dsDNase is purified to apparent homogeneity.

Sample requirement

Purification of nucleic acids prior to HL-dsDNase treatment.

Storage

50% Glycerol: Minimum shelf life 2 years at -20°C.

Glycerol-free: Minimum shelf life 1 year at -20°C.

Both versions tolerates minimum 6 freeze-thaw cycles.

Quality Control

Recommended Protocols

Ordering Info

Quantity
Product Name
SKU
Pack Size
Concentration
Price
1
T4 DNA Ligase
71800-202
250 kU
5000 U/μl
€ 0.00 EUR
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1
AZscript RT
72100-201
10000 U
200 U/μl
€ 119.00 EUR
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1
Heat&Run gDNA Removal Kit
50200-250
250 rxn
€ 531.00 EUR
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1
M-SAN HQ ELISA Kit
70950-001
12x8 Strip plate
€ 635.00 EUR
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1
HL-dsDNase Triton Free
70801-201
250 U
2U/µl
€ 296.00 EUR
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1
PCR Decontamination Kit
80400-100
100 rxn
€ 107.00 EUR
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1
AZtaq™ DNA Polymerase
73100-201
500 U
5 U/µl
€ 73.00 EUR
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1
ArcticZymes Proteinase
71600-201
50 U
>200 U/ml
€ 127.00 EUR
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1
IsoPol®
71500-201
200 U
5U/µl
€ 66.00 EUR
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1
HL-SAN Triton Free
70911-150
500 kU
25
€ 0.00 EUR
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1
ArcticZymes R2D Ligase
71900-105
5 kU
10 U/µl
€ 350.00 EUR
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1
rSAP
70700-201
1000 U
1 U/µl
€ 112.00 EUR
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1
dsDNase Triton Free
70601-201
250 U
2 U/µl
€ 296.00 EUR
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1
Cod UNG Triton Free
70501-201
100 U
1 U/µl
€ 106.00 EUR
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1
IsoPol™ BST⁺
71502-202
1600 U
8 U/µl
€ 69.00 EUR
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1
SAN High Quality
70920-150
500 kU
>250 U/µl
€ 0.00 EUR
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1
HL-ExoI
70100-201
2500 U
>20 U/µl
€ 63.00 EUR
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1
SAN HQ 2.0
70940-150
500 kU
250 U/µl
€ 0.00 EUR
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2
Cod UNG Triton Free
70501-202
1000 U
1 U/µl
€ 442.00 EUR
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2
SAN High Quality
70920-160
5 MU
>250 U/µl
€ 0.00 EUR
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2
PCR Decontamination Kit
80400-500
500 rxn
€ 431.00 EUR
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2
HL-dsDNase Triton Free
70801-202
1000 U
2U/µl
€ 850.00 EUR
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2
IsoPol™ BST⁺
71502-120
10000 U
120 U/µl
€ 339.00 EUR
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2
dsDNase Triton Free
70601-202
1000 U
2 U/µl
€ 850.00 EUR
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2
HL-SAN Triton Free
70911-202
25000 U
25 U/µl
€ 458.00 EUR
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2
T4 DNA Ligase
71800-100
as per request
as per request
€ 0.00 EUR
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2
ArcticZymes R2D Ligase
71900-100
As per request
As per request
€ 0.00 EUR
Request Quote
2
M-SAN HQ
70950-120
200 kU
>250 U/µl
€ 0.00 EUR
Request Quote
2
IsoPol® SD+
71501-201
200 U
5U/µl
€ 66.00 EUR
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2
rSAP
70700-202
5000 U
1 U/µl
€ 436.00 EUR
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2
SAN HQ 2.0
70940-160
5 MU
>250 U/µl
€ 0.00 EUR
Request Quote
2
Heat&Run gDNA Removal Kit
80200-50
50 rxn
€ 135.00 EUR
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2
HL-ExoI
70100-202
500 kU
>20 U/µl
€ 0.00 EUR
Request Quote
2
AZscript RT
72100-100
As per request
As per request
€ 0.00 EUR
Request Quote
2
ArcticZymes Proteinase
71600-110
1000 U
>200 U/ml
€ 1,151.00 EUR
Request Quote
2
AZtaq™ DNA Polymerase
73100-110
5000 U
>50 U/µl
€ 550.00 EUR
Request Quote
3
Cod UNG Triton Free
70501-110
10 kU
1 U/µl
€ 0.00 EUR
Request Quote
3
SAN HQ 2.0
70940-202
25 kU
25 - 30 U/µl
€ 483.00 EUR
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3
rSAP
70700-203
25 kU
1 U/µl
€ 0.00 EUR
Request Quote
3
HL-ExoI
70100-150
50 kU
>20 U/µl
€ 0.00 EUR
Request Quote
3
M-SAN HQ
70950-150
500 kU
>250 U/µl
€ 0.00 EUR
Request Quote
3
ArcticZymes Proteinase
71600-100
As per request
>200 U/ml
€ 0.00 EUR
Request Quote
3
IsoPol® BST⁺ Glycerol Free
71512-100
As per request
As per request
€ 0.00 EUR
Request Quote
3
HL-dsDNase Triton Free
70801-203
2500 U
5U/µ
€ 1,900.00 EUR
Request Quote
3
AZtaq™ DNA Polymerase
73100-100
As per request
As per request
€ 0.00 EUR
Request Quote
3
dsDNase Triton Free
70601-203
2500 U
5U/µl
€ 1,900.00 EUR
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3
SAN High Quality
70920-202
25 kU
25-30 U/µl
€ 483.00 EUR
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4
IsoPol® BST⁺ Glycerol HC Free
71522-100
As per request
As per request
€ 0.00 EUR
Request Quote
4
Cod UNG Triton Free
70501-151
50 kU
1 U/µl
€ 0.00 EUR
Request Quote
4
ArcticZymes Proteinase Glycerol-FREE
71610-100
As per request
>200 U/ml
€ 0.00 EUR
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4
rSAP
70700-101
200 kU
1 U/µl
€ 0.00 EUR
Request Quote
4
SAN High Quality Triton Free
70921-150
500 kU
>250 U/µl
€ 0.00 EUR
Request Quote
4
dsDNase Triton Free
70601-150
50 kU
50U/µl
€ 0.00 EUR
Request Quote
4
SAN HQ 2.0 ELISA Kit
70970-001
1x96 Well Plate
€ 635.00 EUR
Request Quote
4
HL-dsDNase Triton Free
70801-110
100 kU
2 U/µl
€ 0.00 EUR
Request Quote
5
Cod UNG Triton Free
70501-150
50 kU
50 U/µl
€ 0.00 EUR
Request Quote
5
HL-dsDNase Glycerol-Free - Triton Free
70811-50
5000 U
>50 U/µl
€ 0.00 EUR
Request Quote
5
rSAP Glycerol-free
70710-201
5000 U
>20 U/µl
€ 505.00 EUR
Request Quote
4
M-SAN HQ
70950-155
1 MU
>250 U/µl
€ 0.00 EUR
Request Quote
5
SAN High Quality Triton Free
70921-160
5 MU
>250 U/µl
€ 0.00 EUR
Request Quote
5
M-SAN HQ
70950-160
5 MU
>250 U/µl
€ 0.00 EUR
Request Quote
5
dsDNase Triton Free
70601-110
100 kU
2U/µl
€ 0.00 EUR
Request Quote
6
rSAP Glycerol-free
70710-100
As per request
As per request
€ 0.00 EUR
Request Quote
6
Cod UNG Glycerol-Free Triton Free
70511-105
5000 U
50 U/µl
€ 0.00 EUR
Request Quote
6
SAN High Quality Triton Free
70921-202
25 kU
25-30 U/µl
€ 483.00 EUR
Request Quote
6
dsDNase Glycerol Free, Triton Free
70611-50
5000 U
>50 U/µl
€ 0.00 EUR
Request Quote
6
M-SAN HQ
70950-202
25 kU
25-30 U/µl
€ 562.00 EUR
Request Quote
6
HL-dsDNase
70800-201
250 U
2 U/µl
€ 296.00 EUR
Request Quote
7
Cod UNG Glycerol-Free Triton Free
70511-150
50 kU
50 U/µl
€ 0.00 EUR
Request Quote
7
SAN High Quality ELISA Kit
70930-001
1x96 Well Compact Plate Format
€ 635.00 EUR
Request Quote
7
dsDNase
70600-201
250
2 U/µl
€ 296.00 EUR
Request Quote
7
HL-dsDNase
70800-202
1000 U
2 U/µl
€ 850.00 EUR
Request Quote
8
Cod UNG
70500-201
100 U
1 U/µl
€ 106.00 EUR
Request Quote
8
dsDNase
70600-202
1 000
2 U/µl
€ 850.00 EUR
Request Quote
8
HL-dsDNase
70800-203
2500 U
5 U/µl
€ 1,900.00 EUR
Request Quote
9
Cod UNG
70500-202
1000 U
1 U/µl
€ 442.00 EUR
Request Quote
9
dsDNase
70600-203
2 500
€ 1,900.00 EUR
Request Quote
9
HL-dsDNase
70800-150
50 kU
50 U/µl
€ 0.00 EUR
Request Quote
10
dsDNase
70600-150
50 kU
50U/µl
€ 0.00 EUR
Request Quote
10
Cod UNG
70500-110
10 kU
1 U/µl
€ 0.00 EUR
Request Quote
10
HL-dsDNase
70800-110
100 kU
2 U/µl
€ 0.00 EUR
Request Quote
11
dsDNase
70600-110
100 kU
2U/µl
€ 0.00 EUR
Request Quote
11
Cod UNG
70500-151
50 kU
1 U/µl
€ 0.00 EUR
Request Quote
11
HL-dsDNase
70800-120
500 kU
2 U/µl
€ 0.00 EUR
Request Quote
12
Cod UNG
70500-150
50 kU
50 U/µl
€ 0.00 EUR
Request Quote
12
dsDNase Glycerol Free
70610-50
5000 U
80 - 140 U/µl
€ 0.00 EUR
Request Quote
12
HL-dsDNase Glycerol-free
70810-50
5000 U
80 - 140 U/µl
€ 0.00 EUR
Request Quote
13
Cod UNG Glycerol Free
70510-105
5000 U
50 U/µl
€ 0.00 EUR
Request Quote
14
Cod UNG Glycerol Free
70510-150
50 kU
50 U/µl
€ 0.00 EUR
Request Quote
Note: Article no. 71502-202 and 71502-120 are provided with IsoPol® BST+ 10X Buffer and MgSO4 .
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Endonucleases DNA-specific